methods-mcp

Provides MCP tool adapters for Bioconductor methods like limma, DESeq2, and fgsea, enabling statistical analysis of omics data through containerized R execution. It serves as a bridge between MCP clients and bioinformatics tools for reproducible research workflows.

→ webwebb56/methods-mcp · listed on glama

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// key findings

✅

No credential exfiltration, no sensitive file access, no obfuscation

Static analysis found nothing flowing your secrets to unexpected places.

// full audit trail

The full breakdown of what we checked, the deductions that landed, the network hosts, the dependency advisories, and concrete fix guidance is available to verified publishers.

// improvement guidance — verified publishers only

We have 2 concrete improvements we can share with the publisher of this MCP. Each comes with specific guidance to raise the trust score.

// embed badge in your README

[![M8ven Score](https://m8ven.ai/badge/mcp/webwebb56-methods-mcp-1bcxnr)](https://m8ven.ai/mcp/webwebb56-methods-mcp-1bcxnr)

commit: 5221f340ce7ced0c2e678fa552c9c6e29ec04e69

code hash: 41ffa43060e909698f9f5c18cc14aed5f9f68228957d7e53c8fbf23963c79785

verified: 4/18/2026, 7:24:29 PM

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