reactome-db-mcp

Provides direct SQL access to a locally hosted Reactome database, enabling schema discovery, guarded read-only queries, and ergonomic helpers over the full relational schema.

→ tc2fh/reactome-db-mcp · listed on glama

Is this your MCP?

Claim it to get a verified publisher badge, a free copy of our full audit findings, and direct contact for any high-priority issues we find.

Install from

Glama

M8ven verifies MCPs across every public registry — install directly from whichever one you prefer.

// key findings

✅

No credential exfiltration, no sensitive file access, no obfuscation

Static analysis found nothing flowing your secrets to unexpected places.

✅

Open source with a license and README

Anyone can audit the code, the license is declared, and the publisher documents what it does.

🔐

You'll be asked for 1 credential: REACTOME_DB_PASSWORD

These are read from process.env at runtime. Make sure you trust where they’ll be sent.

// required environment variables

This server reads these from process.env. You'll be asked to provide them before it can run.

configREACTOME_DB_HOST— / REACTOME_DB_PORT 127.0.0.1 / 3306 MySQL endpoint

configREACTOME_DB_PORT— REACTOME_DB_HOST / 127.0.0.1 / 3306 MySQL endpoint

configREACTOME_DB_USER— / REACTOME_DB_PASSWORD ro_user / (empty) credentials

🔐 secretREACTOME_DB_PASSWORD— REACTOME_DB_USER / ro_user / (empty) credentials

configREACTOME_DB_NAME— "env": { "": "reactome_local" }

configREACTOME_DB_POOL_SIZE— 4 max pooled connections

configREACTOME_DB_MAX_ROWS— 200 default row cap

configREACTOME_DB_STMT_TIMEOUT_MS— 15000 per-query timeout

configREACTOME_DB_MAX_CELL_CHARS— 2000 per-cell text cap

// full audit trail

The full breakdown of what we checked, the deductions that landed, the network hosts, the dependency advisories, and concrete fix guidance is available to verified publishers.

// improvement guidance — verified publishers only

We have 4 concrete improvements we can share with the publisher of this MCP. Each comes with specific guidance to raise the trust score.

// embed badge in your README

[![M8ven Score](https://m8ven.ai/badge/mcp/tc2fh-reactome-db-mcp-yr1480)](https://m8ven.ai/mcp/tc2fh-reactome-db-mcp-yr1480)

commit: d1a037a48027af3c7dbdc45ce0a9db1e8995daf7

code hash: 095b43d137f165bfa95c19d41af64b4919302d20b3077b5fb53917a8e10a2f56

verified: 6/23/2026, 10:29:18 AM

view raw JSON →