biolit

Item: biolit
Rating: 67
Author: M8ven

Enables LLM-assisted biomedical literature screening and structured extraction from PubMed alerts, PMIDs, DOIs, and GEO accessions, with full-text retrieval and multi-provider LLM support.

→ rachadele/biolit · listed on glama

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// key findings

✅

No credential exfiltration, no sensitive file access, no obfuscation

Static analysis found nothing flowing your secrets to unexpected places.

🔐

You'll be asked for 3 credentials: CORE_API_KEY, NCBI_API_KEY, SEMANTIC_SCHOLAR_API_KEY

These are read from process.env at runtime. Make sure you trust where they’ll be sent.

// required environment variables

This server reads these from process.env. You'll be asked to provide them before it can run.

configUNPAYWALL_EMAIL

configLLM_PROVIDER— You can also set and LLM_MODEL as environment variables.

configLLM_MODEL— You can also set LLM_PROVIDER and as environment variables.

configBIOLIT_BIBTEX— export =~/Zotero/My\ Library.bib

configBIOLIT_BIBTEX_PRIORITY— export =2.0 # lower = tried earlier (default 2.0)

🔐 secretCORE_API_KEY— 8. CORE aggregated green-OA PDF (opt-in; needs )

configBIOLIT_CUSTOM_RESOLVERS— 10. Custom resolvers (institutional OpenURL / library proxy; opt-in via )

configBIOLIT_LANDING_USER_AGENT— export ="Mozilla/5.0 (Macintosh; Intel Mac OS X 10_15_7) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/124.0.0.0 Safari/537.36"

configXDG_CACHE_HOME

configBIOLIT_LOCAL_PDF_DIR— export =~/Papers

configBIOLIT_LOCAL_PDF_PRIORITY— export =3.0 # default 3.0

configBIOLIT_JS_SHELL_CHAR_THRESHOLD— export =2000

🔐 secretNCBI_API_KEY

🔐 secretSEMANTIC_SCHOLAR_API_KEY— The Semantic Scholar API allows roughly 100 unauthenticated requests per day. Set in .env for higher limits.

configZOTERO_DATA_DIR— $/storage/<key>/<filename> (default data dir

configZOTERO_PRIORITY— export =5.0 # lower = tried earlier (default 5.0)

// full audit trail

The full breakdown of what we checked, the deductions that landed, the network hosts, the dependency advisories, and concrete fix guidance is available to verified publishers.

// improvement guidance — verified publishers only

We have 6 concrete improvements we can share with the publisher of this MCP. Each comes with specific guidance to raise the trust score.

// embed badge in your README

[![M8ven Score](https://m8ven.ai/badge/mcp/rachadele-biolit-1a1qzq)](https://m8ven.ai/mcp/rachadele-biolit-1a1qzq)

commit: 8cbcb247d95cd33bed4256bfc5a8436cfb16729f

code hash: 419a0f16da494596cb662362b25d7e76f5210e135181fbe2e66d71939b346266

verified: 7/27/2026, 10:23:34 AM

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