71
/ 100
19 days ago
glama
MCP Atomic Toolkit
A FastMCP server for atomistic modeling workflows that enables building structures, running geometry optimization and molecular dynamics, and analyzing results with downloadable artifacts.
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// key findings
✅
No credential exfiltration, no sensitive file access, no obfuscation
Static analysis found nothing flowing your secrets to unexpected places.
✅
Open source with a license and README
Anyone can audit the code, the license is declared, and the publisher documents what it does.
// required environment variables
This server reads these from
process.env. You'll be asked to provide them before it can run.config
LOG_LEVELconfig
HOSTconfig
PORT— uvicorn mcp_atomictoolkit.http_app:app --host 0.0.0.0 --port $config
ARTIFACT_BASE_URLconfig
PUBLIC_BASE_URLconfig
JAX_PLUGINSconfig
JAX_SKIP_JAXLIB_PJRT_CUDA_PLUGINconfig
JAX_SKIP_JAXLIB_PJRT_ROCM_PLUGINconfig
JAX_PLATFORMSconfig
JAX_PLATFORM_NAMEconfig
CUDA_VISIBLE_DEVICESconfig
JAX_CUDA_VISIBLE_DEVICES// full audit trail
The full breakdown of what we checked, the deductions that landed, the network hosts, the dependency advisories, and concrete fix guidance is available to verified publishers.
// improvement guidance — verified publishers only
We have 4 concrete improvements we can share with the publisher of this MCP. Each comes with specific guidance to raise the trust score.
// embed badge in your README
[](https://m8ven.ai/mcp/qfoldit-atomic-mcp-1ihxg3)commit: ef5fc88aeae12e66cc77dc7cb89ca76df0c1eb3d
code hash: bb5ae28d198562b797e26c30ce07a4eb141c52f1a4498afb97f8400b918fd8fb
verified: 7/12/2026, 8:31:55 AM