openpgx

Enables AI-driven pharmacogenomic analysis by querying structured genetic variant, drug response, and disease risk data. Supports natural language questions about medications, traits, and health risks based on user genome data, with privacy-first local execution.

→ open-pgx/openpgx · listed on glama

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// key findings

⚠️

Tool descriptions don’t match what handlers do

1 tool describes read intent but its handler mutates — save_drug_research (line 1482: mkdirSync(cacheDir, { recursive: true }))

⚠️

Known vulnerabilities in dependencies: 2 high

Affects packages this MCP installs at runtime. Upgrade or remove the affected dependency.

✅

16 tools verified — handlers match their declared behaviour

11 read-only tools verified — handlers contain no write/delete/exec

✅

No credential exfiltration, no sensitive file access, no obfuscation

Static analysis found nothing flowing your secrets to unexpected places.

🔐

You'll be asked for 1 credential: OPENAI_API_KEY

These are read from process.env at runtime. Make sure you trust where they’ll be sent.

// required environment variables

This server reads these from process.env. You'll be asked to provide them before it can run.

🔐 secretOPENAI_API_KEY

configPORT

// full audit trail

The full breakdown of what we checked, the deductions that landed, the network hosts, the dependency advisories, and concrete fix guidance is available to verified publishers.

// improvement guidance — verified publishers only

We have 8 concrete improvements we can share with the publisher of this MCP. Each comes with specific guidance to raise the trust score.

// embed badge in your README

[![M8ven Score](https://m8ven.ai/badge/mcp/open-pgx-openpgx-gvzti1)](https://m8ven.ai/mcp/open-pgx-openpgx-gvzti1)

commit: 571aa94c38f79b979907fe165c84686e5c341e3e

code hash: 61c830d118d5021b2b8de259fdb81d9b101aa64d6d01a5fb96aba0a0ee1416fb

verified: 6/13/2026, 10:20:23 AM

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