BridgeDb MCP Server

Item: BridgeDb MCP Server
Rating: 67
Author: M8ven

Provides biological identifier mapping via BridgeDb webservice, allowing LLMs to convert identifiers like Ensembl to HGNC symbols through MCP tools.

→ marvinm2/bridgedb-mcp · listed on glama

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// key findings

✅

No credential exfiltration, no sensitive file access, no obfuscation

Static analysis found nothing flowing your secrets to unexpected places.

// required environment variables

This server reads these from process.env. You'll be asked to provide them before it can run.

configBRIDGEDB_BASE_URL— Point at your own deployment (e.g. the VHP4Safety

configBRIDGEDB_TIMEOUT— 30 HTTP timeout in seconds

configBRIDGEDB_MCP_TRANSPORT— streamable-http bridgedb-mcp

// full audit trail

The full breakdown of what we checked, the deductions that landed, the network hosts, the dependency advisories, and concrete fix guidance is available to verified publishers.

// improvement guidance — verified publishers only

We have 6 concrete improvements we can share with the publisher of this MCP. Each comes with specific guidance to raise the trust score.

// embed badge in your README

[![M8ven Score](https://m8ven.ai/badge/mcp/marvinm2-bridgedb-mcp-4e8cej)](https://m8ven.ai/mcp/marvinm2-bridgedb-mcp-4e8cej)

commit: 25389229b3d5785e7795cd98ef04ce25a300307e

code hash: 457749be14beb5ce91015468316cc25d8dd4b0a897853666335d22af3fd0b4d3

verified: 7/25/2026, 8:38:12 AM

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