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PubMed MCP Server

Provides comprehensive access to NCBI's PubMed database of over 36 million biomedical citations, allowing users to search, retrieve, and analyze literature directly through MCP tools. It supports advanced queries, citation management, full-text retrieval from PubMed Central, and precise discovery using MeSH terms.

→ Augmented-Nature/PubMed-MCP-Server· listed on glama
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// key findings
⚠️
Known vulnerabilities in dependencies: 16 high
Affects packages this MCP installs at runtime. Upgrade or remove the affected dependency.
✅
No credential exfiltration, no sensitive file access, no obfuscation
Static analysis found nothing flowing your secrets to unexpected places.
✅
Open source with a license and README
Anyone can audit the code, the license is declared, and the publisher documents what it does.
🔐
You'll be asked for 1 credential: NCBI_API_KEY
These are read from process.env at runtime. Make sure you trust where they’ll be sent.
// known CVEs in dependencies16 high12 low

Disclosed vulnerabilities in this server's declared npm dependencies (via OSV). Whether each is reachable depends on the installed versions.

high@modelcontextprotocol/sdk@1.0.4GHSA-8r9q-7v3j-jr4g

Anthropic's MCP TypeScript SDK has a ReDoS vulnerability

high@modelcontextprotocol/sdk@1.0.4GHSA-w48q-cv73-mx4w

Model Context Protocol (MCP) TypeScript SDK does not enable DNS rebinding protection by default

highaxios@1.7.9GHSA-35jp-ww65-95wh

axios Vulnerable to Full Man-in-the-Middle via Prototype Pollution Gadget in `config.proxy`

highaxios@1.7.9GHSA-3g43-6gmg-66jw

axios Vulnerable to Credential Theft and Response Hijacking via Prototype Pollution Gadget in Config Merge

highaxios@1.7.9GHSA-43fc-jf86-j433

Axios is Vulnerable to Denial of Service via __proto__ Key in mergeConfig

Depend on this server? Get alerted when its CVEs change.Watch this server free →
// required environment variables
This server reads these from process.env. You'll be asked to provide them before it can run.
🔐 secretNCBI_API_KEY— "": "your_api_key_here",
configNCBI_EMAIL— "": "your_email@example.com"
// full audit trail
The full breakdown of what we checked, the deductions that landed, the network hosts, the dependency advisories, and concrete fix guidance is available to verified publishers.
// improvement guidance — verified publishers only
We have 4 concrete improvements we can share with the publisher of this MCP. Each comes with specific guidance to raise the trust score.
// embed badge in your README
[![M8ven Score](https://m8ven.ai/badge/mcp/augmented-nature-pubmed-mcp-server-merjtt)](https://m8ven.ai/mcp/augmented-nature-pubmed-mcp-server-merjtt)
commit: 8fd044db123af9b0cb399ca18e6ab9b8c225e5ee
code hash: 54682219e8216046c460d6b6ab192a9fa283906f12f19ef7aeadc0f8ad819e6f
verified: 6/17/2026, 12:20:37 PM
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