Nextflow Developer Tools

Item: Nextflow Developer Tools
Rating: 45
Author: M8ven

Streamlines Nextflow development by providing tools for building, testing, and executing pipelines directly from local repositories.

→ adamrtalbot/mcp-nextflow · listed on pulsemcp

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// key findings

⚠️

Tool descriptions don’t match what handlers do

1 tool describes read intent but its handler mutates — get_nextflow_version (line 346: process = subprocess.run()

✅

No credential exfiltration, no sensitive file access, no obfuscation

Static analysis found nothing flowing your secrets to unexpected places.

// required environment variables

This server reads these from process.env. You'll be asked to provide them before it can run.

configNEXTFLOW_DIR— "": "/path/to/your/nextflow"

// full audit trail

The full breakdown of what we checked, the deductions that landed, the network hosts, the dependency advisories, and concrete fix guidance is available to verified publishers.

// improvement guidance — verified publishers only

We have 8 concrete improvements we can share with the publisher of this MCP. Each comes with specific guidance to raise the trust score.

// embed badge in your README

[![M8ven Score](https://m8ven.ai/badge/mcp/adamrtalbot-mcp-nextflow-32cqeq)](https://m8ven.ai/mcp/adamrtalbot-mcp-nextflow-32cqeq)

commit: 8cf6a3848bb985bf8c887cd7ba41bb681a2345f7

code hash: 0daf05b7ecdf6f28311aea84864703f5ee031c560556dc66525df6003dd1acce

verified: 7/23/2026, 9:17:37 AM

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